Publications

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2018

Florian Barth, Evgeny Kim, Sandra Murr, and Roman Klinger. A reporting tool for relational visualization and analysis of character mentions in literature. In Book of Abstracts -- Digital Humanities im deutschsprachigen Raum, Cologne, Germany, March 2018. accepted. [ bib ]

Manuel Braun, Roman Klinger, Sebastian Padó, and Gabriel Viehhauser. Digitale modellierung von figurenkomplexität am beispiel des parzival von wolfram von eschenbach. In Book of Abstracts -- Digital Humanities im deutschsprachigen Raum, Cologne, Germany, March 2018. accepted. [ bib ]

2017

H. ter Horst, M. Hartung, R. Klinger, M. Zwick, and P. Cimiano. Predicting Disease-Gene Associations using Cross-Document Graph-based Features. ArXiv e-prints, September 2017. [ bib | arXiv | http | .pdf ]

Nicole Brazda, Hendrik ter Horst, Matthias Hartung, Cord Wiljes, Veronica Estrada, Roman Klinger, Wolfgang Kuchinke, Hans Werner Müller, and Philipp Cimiano. SCIO: An ontology to support the formalization of pre-clinical spinal cord injury experiments. In Workshop on Ontologies and Data in Life Sciences (ODLS 2017), Joint Workshops on Ontologies (JOWO), Bolzano, Italy, September 2017. accepted. [ bib | http ]

Nils Reiter, Sarah Schulz, Gerhard Kremer, Roman Klinger, Gabriel Viehhauser, and Jonas Kuhn. Teaching computational aspects in the digital humanities program at university of stuttgart -- intentions and experiences. In Proceedings of the Workshop on Teaching NLP for Digital Humanities (Teach4DH 2017) co-located with GSCL 2017, pages 43--48, 2017. [ bib | .pdf ]

Camilo Thorne and Roman Klinger. Towards confidence estimation for typed protein-protein relation extraction. In Proceedings of the Biomedical NLP Workshop associated with RANLP, Varna, Bulgaria, September 2017. Association for Computational Linguistics. accepted. [ bib | .pdf ]

Matthias Hartung, Roman Klinger, Lars Vogel, and Franziska Schmidtke. Ranking right-wing extremist social media profiles by similarity to democratic and extremist groups. In Proceedings of the 8th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, Copenhagen, Denmark, 2017. Workshop at Conference on Empirical Methods in Natural Language Processing, Association for Computational Linguistics. [ bib | http | .pdf ]

Hendrik Schuff, Jeremy Barnes, Julian Mohme, Sebastian Padó, and Roman Klinger. Annotation, modelling and analysis of fine-grained emotions on a stance and sentiment detection corpus. In Proceedings of the 8th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, Copenhagen, Denmark, 2017. Workshop at Conference on Empirical Methods in Natural Language Processing, Association for Computational Linguistics. [ bib | http | .pdf ]

Jeremy Barnes, Roman Klinger, and Sabine Schule im Walde. Assessing state-of-the-art sentiment models on state-of-the-art sentiment datasets. In Proceedings of the 8th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, Copenhagen, Denmark, 2017. Workshop at Conference on Empirical Methods in Natural Language Processing, Association for Computational Linguistics. [ bib | http | .pdf ]

Maximilian Köper, Evgeny Kim, and Roman Klinger. IMS at EmoInt-2017: Emotion intensity prediction with affective norms, automatically extended resources and deep learning. In Proceedings of the 8th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, Copenhagen, Denmark, 2017. Workshop at Conference on Empirical Methods in Natural Language Processing, Association for Computational Linguistics. [ bib | http | .pdf ]

Evgeny Kim, Sebastian Padó, and Roman Klinger. Investigating the relationship between literary genres and emotional plot development. In Proceedings of the Joint SIGHUM Workshop on Computational Linguistics for Cultural Heritage, Social Sciences, Humanities and Literature, pages 17--26, Vancouver, Canada, August 2017. Association for Computational Linguistics. [ bib | http | .pdf ]

Matthias Hartung, Roman Klinger, Franziska Schmidtke, and Lars Vogel. Identifying right-wing extremism in german twitter profiles: A classification approach. In Flavius Frasincar, Ashwin Ittoo, Le Minh Nguyen, and Elisabeth Métais, editors, Natural Language Processing and Information Systems: 22nd International Conference on Applications of Natural Language to Information Systems, NLDB 2017, Liège, Belgium, June 21-23, 2017, Proceedings, pages 320--325, Cham, 2017. Springer International Publishing. [ bib | DOI | http | .pdf ]

Mario Sänger, Ulf Leser, and Roman Klinger. Fine-grained opinion mining from mobile app reviews with word embedding features. In Flavius Frasincar, Ashwin Ittoo, Le Minh Nguyen, and Elisabeth Métais, editors, Natural Language Processing and Information Systems: 22nd International Conference on Applications of Natural Language to Information Systems, NLDB 2017, Liège, Belgium, June 21-23, 2017, Proceedings, pages 3--14, Cham, 2017. Springer International Publishing. [ bib | DOI | http | .pdf ]

Roman Klinger. Does optical character recognition and caption generation improve emotion detection in microblog posts? In Flavius Frasincar, Ashwin Ittoo, Le Minh Nguyen, and Elisabeth Métais, editors, Natural Language Processing and Information Systems: 22nd International Conference on Applications of Natural Language to Information Systems, NLDB 2017, Liège, Belgium, June 21-23, 2017, Proceedings, pages 313--319, Cham, 2017. Springer International Publishing. [ bib | DOI | http | .pdf ]

Hanna Kicherer, Marcel Dittrich, Lukas Grebe, Christian Scheible, and Roman Klinger. What you use, not what you do: Automatic classification of recipes. In Flavius Frasincar, Ashwin Ittoo, Le Minh Nguyen, and Elisabeth Métais, editors, Natural Language Processing and Information Systems: 22nd International Conference on Applications of Natural Language to Information Systems, NLDB 2017, Liège, Belgium, June 21-23, 2017, Proceedings, pages 197--209, Cham, 2017. Springer International Publishing. [ bib | DOI | http | .pdf ]

Evgeny Kim, Sebastian Padó, and Roman Klinger. Prototypical Emotion Developments in Literary Genres. In Digital Humanities 2017: Conference Abstracts, Montréal, Canada, August 2017. McGill University and Université de Montréal. [ bib | .pdf | .pdf ]

2016

Janik Jaskolski, Fabian Siegberg, Thomas Tibroni, Philipp Cimiano, and Roman Klinger. Opinion mining in online reviews about distance education programs, 2016. arXiv; preprint. [ bib | http | .pdf ]

Roman Klinger, Surayya Samat Suliya, and Nils Reiter. Automatic Emotion Detection for Quantitative Literary Studies -- A case study based on Franz Kafka's “Das Schloss” and “Amerika”. In Digital Humanities 2016: Conference Abstracts, pages 826--828, Kraków, Poland, July 2016. Jagiellonian University and Pedagogical University. [ bib | http | .pdf ]

Jennifer Ling and Roman Klinger. An empirical, quantitative analysis of the differences between sarcasm and irony. In Harald Sack, Giuseppe Rizzo, Nadine Steinmetz, Dunja Mladenić, Sören Auer, and Christoph Lange, editors, The Semantic Web: ESWC 2016 Satellite Events, Heraklion, Crete, Greece, May 29 -- June 2, 2016, Revised Selected Papers, pages 203--216. Springer International Publishing, 2016. Best Paper. [ bib | DOI | http | .pdf ]

Mario Sänger, Ulf Leser, Steffen Kemmerer, Peter Adolphs, and Roman Klinger. SCARE ― The Sentiment Corpus of App Reviews with Fine-grained Annotations in German. In Nicoletta Calzolari (Conference Chair), Khalid Choukri, Thierry Declerck, Marko Grobelnik, Bente Maegaard, Joseph Mariani, Asuncion Moreno, Jan Odijk, and Stelios Piperidis, editors, Proceedings of the Tenth International Conference on Language Resources and Evaluation (LREC 2016), Paris, France, may 2016. European Language Resources Association (ELRA). [ bib | .html ]

Christian Scheible, Roman Klinger, and Sebastian Padó. Model architectures for quotation detection. In Proceedings of the 54th Annual Meeting of the Association for Computational Linguistics (Volume 1: Long Papers), pages 1736--1745, Berlin, Germany, August 2016. Association for Computational Linguistics. [ bib | .pdf ]

2015

Wiltrud Kessler, Roman Klinger, and Jonas Kuhn. Towards opinion mining from reviews for the prediction of product rankings. In Proceedings of the 6th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, pages 51--57, Lisboa, Portugal, September 2015. Association for Computational Linguistics. [ bib | http | .pdf ]

Roman Klinger and Philipp Cimiano. Instance selection improves cross-lingual model training for fine-grained sentiment analysis. In Proceedings of the Nineteenth Conference on Computational Natural Language Learning, pages 153--163, Beijing, China, July 2015. Association for Computational Linguistics. [ bib | http | .pdf ]

Andreas Stöckel, Benjamin Paassen, Raphael Dickfelder, Jan Philipp Göpfert, Nicole Brazda, Hans Werner Müller, Philipp Cimiano, Matthias Hartung, and Roman Klinger. Scie: Information extraction for spinal cord injury preclinical experiments – a webservice and open source toolkit. bioRxiv, January 2015. preprint. [ bib | DOI ]

2014

Shweta Bagewadi, Tamara Bobić, Martin Hofmann-Apitius, Juliane Fluck, and Roman Klinger. Detecting mirna mentions and relations in biomedical literature [version 3; referees: 2 approved, 1 approved with reservations]. F1000Research, 3(205), 2014. [ bib | DOI | http ]

Konstantin Buschmeier, Philipp Cimiano, and Roman Klinger. An impact analysis of features in a classification approach to irony detection in product reviews. In Proceedings of the 5th Workshop on Computational Approaches to Subjectivity, Sentiment and Social Media Analysis, pages 42--49, Baltimore, Maryland, June 2014. Association for Computational Linguistics. [ bib | http ]

Matthias Hartung, Roman Klinger, Matthias Zwick, and Philipp Cimiano. Towards gene recognition from rare and ambiguous abbreviations using a filtering approach. In Proceedings of BioNLP 2014, pages 118--127, Baltimore, Maryland, June 2014. Association for Computational Linguistics. [ bib | http ]

Roman Klinger and Philipp Cimiano. The USAGE review corpus for fine grained multi lingual opinion analysis. In Nicoletta Calzolari, Khalid Choukri, Thierry Declerck, Hrafn Loftsson, Bente Maegaard, Joseph Mariani, Asuncion Moreno, Jan Odijk, and Stelios Piperidis, editors, Proceedings of the Ninth International Conference on Language Resources and Evaluation (LREC'14), pages 2211--2218, Reykjavik, Iceland, May 2014. European Language Resources Association (ELRA). ACL Anthology Identifier: L14-1656. [ bib | .pdf ]

Benjamin Paassen, Andreas Stöckel, Raphael Dickfelder, Jan Philip Göpfert, Nicole Brazda, Tarek Kirchhoffer, Hans Werner Müller, Roman Klinger, Matthias Hartung, and Philipp Cimiano. Ontology-based extraction of structured information from publications on preclinical experiments for spinal cord injury treatments. In Proceedings of the Third Workshop on Semantic Web and Information Extraction, pages 25--32, Dublin, Ireland, August 2014. Association for Computational Linguistics and Dublin City University. [ bib | http ]

Josef Ruppenhofer, Roman Klinger, Julia Maria Struß, Jonathan Sonntag, and Michael Wiegand. IGGSA Shared Tasks on German Sentiment Analysis. In Gertrud Faaß and Josef Ruppenhofer, editors, Workshop Proceedings of the 12th Edition of the KONVENS Conference, Hildesheim, Germany, October 2014. University of Hildesheim. [ bib | .pdf ]

2013

Tamara Bobic and Roman Klinger. Committee-based selection of weakly labeled instances for learning relation extraction. Research in Computing Science, 70:187--197, 2013. Proceedings of the Conference on Intelligent Text Processing and Computational Linguistics. [ bib | .html | .pdf ]

Roman Klinger and Philipp Cimiano. Joint and pipeline probabilistic models for fine-grained sentiment analysis: Extracting aspects, subjective phrases and their relations. In 2013 IEEE 13th International Conference on Data Mining Workshops (ICDMW), pages 937--944, Dec 2013. [ bib | DOI | .pdf ]

Roman Klinger and Philipp Cimiano. Bi-directional inter-dependencies of subjective expressions and targets and their value for a joint model. In Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics (Volume 2: Short Papers), pages 848--854, Sofia, Bulgaria, August 2013. Association for Computational Linguistics. [ bib | http ]

John Philip McCrae, Philipp Cimiano, and Roman Klinger. Orthonormal explicit topic analysis for cross-lingual document matching. In Proceedings of the 2013 Conference on Empirical Methods in Natural Language Processing, pages 1732--1740, Seattle, Washington, USA, October 2013. Association for Computational Linguistics. [ bib | http ]

2012

Fotis Aisopos, Magdalini Kardara, Philipp Senger, Roman Klinger, Athanasios Papaoikonomou, Konstantinos Tserpes, Michael Gardner, and Theodora A. Varvarigou. E-government and policy simulation in intelligent virtual environments. In Karl-Heinz Krempels and José Cordeiro, editors, WEBIST, pages 129--135. SciTePress, 2012. [ bib | http | .pdf ]

Tamara Bobic, Roman Klinger, Philippe Thomas, and Martin Hofmann-Apitius. Improving distantly supervised extraction of drug-drug and protein-protein interactions. In Proceedings of the Joint Workshop on Unsupervised and Semi-Supervised Learning in NLP, pages 35--43, Avignon, France, April 2012. Association for Computational Linguistics. [ bib | http ]

Roman Klinger, Philipp Senger, Sumit Madan, and Michal Jacovi. Online communities support policy-making: The need for data analysis. In Efthimios Tambouris, Ann Macintosh, and Øystein Sæbø, editors, Electronic Participation, volume 7444 of Lecture Notes in Computer Science, pages 132--143. Springer Berlin Heidelberg, 2012. [ bib | DOI | http ]

Philippe Thomas, Tamara Bobić, Ulf Leser, Martin Hofmann-Apitius, and Roman Klinger. Weakly labeled corpora as silver standard for drug-drug and protein-protein interaction. In Proceedings of the Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM) on Language Resources and Evaluation Conference (LREC), Istanbul, Turkey, 2012. [ bib ]

2011

Roman Klinger. Automatically selected skip edges in conditional random fields for named entity recognition. In Proceedings of the International Conference Recent Advances in Natural Language Processing 2011, pages 580--585, Hissar, Bulgaria, September 2011. RANLP 2011 Organising Committee. [ bib | http ]

Roman Klinger. Conditional Random Fields for Named Entity Recognition - Feature Selection and Optimization in Biology and Chemistry. Fraunhofer Series in Information and Communication Technology. Shaker, Aachen, Germany, 2011. [ bib | http ]

Roman Klinger, Sebastian Riedel, and Andrew McCallum. Inter-event dependencies support event extraction from biomedical literature. In Mining Complex Entities from Network and Biomedical Data (MIND), European Conference on Machine Learning and Principles and Practice of Knowledge Discovery in Databases (ECML PKDD), 2011. [ bib | .pdf ]

Philippe Thomas, Illés Solt, Roman Klinger, and Ulf Leser. Learning protein protein interaction extraction using distant supervision. In Proceedings of Workshop on Robust Unsupervised and Semisupervised Methods in Natural Language Processing, pages 25--32, Hissar, Bulgaria, September 2011. [ bib | http ]

Philippe E. Thomas, Roman Klinger, Laura I. Furlong, Martin Hofmann-Apitius, and Christoph M. Friedrich. Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers. BMC Bioinformatics, 12(Suppl 4)(S4), 2011. [ bib | DOI ]

2010

Harsha Gurulingappa, Roman Klinger, Martin Hofmann-Apitius, and Juliane Fluck. An empirical evaluation of resources for the identification of diseases and adverse effects in biomedical literature. In 2nd Workshop on Building and evaluating resources for biomedical text mining (7th edition of the Language Resources and Evaluation Conference), Valetta, Malta, May 2010. [ bib | .pdf ]

Bernd Müller, Roman Klinger, Harsha Gurulingappa, Heinz-Theodor Mevissen, Martin Hofmann-Apitius, Juliane Fluck, and Christoph M. Friedrich. Abstracts versus full texts and patents: A quantitative analysis of biomedical entities. In Proceedings of the 1st IRF Conference, Lecture Notes in Computer Science. Springer, 2010. [ bib | http ]

2009

Christoph M. Friedrich and Roman Klinger. rSMILE, an interface to the Bayesian Network package GeNIe/SMILE. In Book of Abstracts of the R User Conference (useR!), page 104, Rennes, France, 2009. [ bib | .pdf ]

Harsha Gurulingappa, Bernd Müller, Roman Klinger, Heinz-Theo Mevissen, Martin Hofmann-Apitius, Juliane Fluck, and Christoph M. Friedrich. Patent retrieval in chemistry based on semantically tagged named entities. In Ellen M. Voorhees and Lori P. Buckland, editors, The Eighteenth Text RETrieval Conference (TREC 2009) Proceedings, Gaithersburg, Maryland, USA, November 2009. [ bib | .pdf ]

Roman Klinger and Christoph M. Friedrich. User's choice of precision and recall in named entity recognition. In Galia Angelova, Kalina Bontcheva, Ruslan Mitkov, Nicolas Nicolov, and Nicolai Nikolov, editors, Proceedings of Recent Advances in Natural Language Processing (RANLP), pages 192--196, Borovets, Bulgaria, September 2009. [ bib | .pdf ]

Roman Klinger and Christoph M. Friedrich. Feature subset selection in conditional random fields for named entity recognition. In Galia Angelova, Kalina Bontcheva, Ruslan Mitkov, Nicolas Nicolov, and Nicolai Nikolov, editors, Proceedings of Recent Advances in Natural Language Processing (RANLP), pages 185--191, Borovets, Bulgaria, September 2009. [ bib | .pdf ]

Corinna Kolářik, Roman Klinger, and Martin Hofmann-Apitius. Identification of Histone Modifications in Biomedical Text for Supporting Epigenomic Research. BMC Bioinformatics, 10(S28), January 2009. Proceedings of the Asia Pacific Bioinformatics Conference (APBC). [ bib | DOI ]

Roelof Risselada, Christoph M. Friedrich, Christian Ebeling, Roman Klinger, Anne Bauer-Mehren, Manuel Pastor, Maria Cruz Villa, Jose M. Pozo, Alejandro F. Frangi, and Martin Hofmann-Apitius. Workflows for data mining in integrated multi-modal data of intracranial aneurysms using knime. In Book of Abstracts of the R User Conference (useR!), page 165, Rennes, France, 2009. [ bib ]

2008

Martin Hofmann-Apitius, Juliane Fluck, Laura Furlong, Oriol Fornes, Corinna Kolářik, Susanne Hanser, Martin Boecker, Stefan Schultz, Ferran Sanz, Roman Klinger, Theo Mevissen, Tobias Gatterneyer, Baldo Oliva, and Christoph Friedrich. Knowledge environments representing molecular entities for the virtual physiological human. Philosophical Transactions of the Royal Society A, 2008. PMID 18559317. [ bib | DOI ]

Roman Klinger, Corinna Kolářik, Juliane Fluck, Martin Hofmann-Apitius, and Christoph M. Friedrich. Detection of IUPAC and IUPAC-like Chemical Names. Bioinformatics, 24(13):i268--i276, 2008. Proceedings of the International Conference Intelligent Systems for Molecular Biology (ISMB). [ bib | DOI ]

Corinna Kolářik, Roman Klinger, Christoph M. Friedrich, Martin Hofmann-Apitius, and Juliane Fluck. Chemical Names: Terminological Resources and Corpora Annotation. In Workshop on Building and evaluating resources for biomedical text mining (6th edition of the Language Resources and Evaluation Conference), pages 51--58, Marrakech, Morocco, May 2008. [ bib | .pdf ]

Larry Smith, Lorraine K. Tanabe, Rie Johnson nee Ando, Cheng-Ju Juo, I-Fang Chung, Chun-Nan Hsu, Yu-Shi Lin, Roman Klinger, Christoph M. Friedrich, Kuzman Ganchev, Manabu Torii, Hongfang Liu, Barry Haddow, Craig A. Struble, Richard J. Povinelli, Andreas Vlachos, William A. Baumgartner Jr., Lawrence Hunter, Bob Carpenter, Richard Tzong-Han Tsai, Hong jie Dai, Feng Liu, Yifei Chen, Chengjie Sun, Sophia Katrenko, Pieter Adriaans, Christian Blaschke, Rafel Torres Perez, Mariana Neves, Preslav Nakov, Anna Divoli, Manuel Mana, Jacinto Mata-Vazquez, and W. John Wilbur. Overview of biocreative ii gene mention recognition. Genome Biology, 9(Suppl 2):S2.2--S2.18, September 2008. [ bib | DOI | http ]

2007

Roman Klinger, Christoph M. Friedrich, Juliane Fluck, and Martin Hofmann-Apitius. Named Entity Recognition with Combinations of Conditional Random Fields. In Proceedings of the Second BioCreative Challenge Evaluation Workshop, pages 89--91, Madrid, Spain, April 2007. [ bib | .pdf ]

Roman Klinger, Laura I. Furlong, Christoph M. Friedrich, Heinz Theodor Mevissen, Juliane Fluck, Ferran Sanz, and Martin Hofmann-Apitius. Identifying gene specific variations in biomedical text. Journal of Bioinformatics and Computational Biology, 5(6):1277--1296, December 2007. PMID 18172929. [ bib | DOI | .pdf ]

Roman Klinger and Günter Rudolph. Automatic Composition of Music with Methods of Computational Intelligence. WSEAS Transactions in Information Science and Applications, 4(3):508--515, March 2007. [ bib | .pdf ]

Roman Klinger and Katrin Tomanek. Classical Probabilistic Models and Conditional Random Fields. Technical Report TR07-2-013, Department of Computer Science, Dortmund University of Technology, December 2007. ISSN 1864-4503, Technical Report. [ bib | .pdf ]

2006

Roman Klinger and Günter Rudolph. Evolutionary Composition of Music with Learned Melody Evaluation. In Nikos Mastorakis and Antonella Cecchi, editors, Proceedings of the 5th WSEAS Int. Conference on COMPUTATIONAL INTELLIGENCE, MAN-MACHINE SYSTEMS and CYBERNETICS (CIMMACS '06), pages 234--239, Venice, Italy, November 2006. Best Student's Paper. [ bib | .pdf ]

2005

Miriam Bützken, Stefan Edelkamp, Abdelaziz Elalaoui, Kenneth Kahl, Rachid Karmouni, Roman Klinger, Khalid Lahiane, Andrea Matuszewski, Tilman Mehler, Mohammed Nazih, Michael Nelskamp, and Arne Wiggers. An Integrated Toolkit for Modern Action Planning. In 19th Workshop on New Results in Planning, Scheduling and Design (PUK), pages 1--11, 2005. [ bib | .pdf ]

Theses